Browse Metadata of Sesbania cannabina


Sample Set Information

Title LC-MS based untargeted metabolome analysis of Sesbania cannabina
Description Compounds in various samples were analyzed using liquid chromatography-mass spectrometry (LC-MS). The same analytical conditions are applied to all samples.

Sample Information

Organism Sesbania cannabina
Planting location Harvested in Shanghai Chenshan Botanical Garden

Sample Preparation Information

Description After harvesting, the samples were immediately frozen in liquid nitrogen before stored at -80 °C. The freeze-dried sample was ground to a fine powder using tissue grinder and stored at-80 °C until use.

Analytical Method Information

Instrument Q Exactive hybrid Q-Orbitrap-high resolution mass spectrometry (Q-Orbitrap-HRMS) (Thermo Fisher Scientific)
Instrument type UPLC-ESI-Q-Orbitrap
Ionization ESI
Ion Mode Positive and Negative
Description - Compound Extraction
In brief, the freeze-dried tissues were ground using a tissue grinder (catalog No. 05010997; Shanghai BiHeng Biotechnology Company Limited, Shanghai, China) for 2 min at 55 Hz. 150 mg of powder was weighed and mixed with 1.5 ml 70% aqueous methanol (containing 1 mg/L capsaicin as the internal standard). The samples were vortexed every 10 min for 3 times and extracted overnight at 4 °C. Following centrifugation at 12000 g for 15 min, all the supernatants were filtered using a 0.22 μm filter and transferred to a liquid phase bottle for subsequent analysis.

- Liquid chromatography (LC)-mass spectrometry (MS) analysis
Samples were analyzed on a Waters Acquity Ultra Performance Liquid Chromatography system equipped with an ACQUITY UPLC BEH C18 column (1.7 μm, 2.1 mm × 100 mm) coupled with Q Exactive hybrid Q-Orbitrap-high resolution mass spectrometry (Q-Orbitrap-HRMS) (Thermo Fisher Scientific).
Solvent 70% aqueous methanol
Column ACQUITY UPLC BEH C18 column (1.7 μm, 2.1 mm × 100 mm)
Total separation time 30 min
Mobile phase (A) water with 0.04% acetic acid and (B) acetonitrile with 0.04% acetic acid
Gradient 95:5 A/B at 0 min,5:95 A/B at 20.0 min, 5:95 A/B at 24.0 min, 95:5 A/B at 24.1 min, and 95:5 A/B at 30.0 min.
Flow rate 0.25 ml/min
CollisionEnergy 27.50(15eV,40eV)